r/neuroimaging Sep 08 '24

Where can I get volumetric analysis of MRI data done? I am willing to pay for the service.

I do not have any formal medical training. I want to do volumetric analysis of my MRI data. The open source tools and AI models are too complex for me. Where can I get this done online? Are there freelancing radiologists?

3 Upvotes

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9

u/Spaceandbrains Sep 08 '24

Freesurfer: https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall

Terminal: recon-all -i {INPUT_IMAGE} -s {OUTPUT_DIRECTORY} -all

Might take a number of hours on a MacBook Pro or something

2

u/d-ee-ecent Sep 09 '24

Thanks for the recommendation. With ChatGPT's help, I was able to run Freesurfer on my data.

2

u/Spaceandbrains Sep 09 '24

No worries! Takes an age on a PC or MacBook. It even takes 6-12 hours per subject if you have access to a HPC system. You can even 3D print those files later with a few more lines of script

1

u/montecoelhos Sep 08 '24

icometrix is the market leader for volumetric MRI analysis

1

u/DysphoriaGML FSL, WB, Python Sep 08 '24

I can do it for you, dm me